Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 6-dehydrogenase | BK664_00830 | Not Available | Positive | 223127 - 224506 | 51008.4 |
| glycosyltransferase | BK664_00835 | Not Available | Positive | 224503 - 226098 | 58495.1 |
| lysr family transcriptional regulator | BK664_00840 | Not Available | Negative | 226339 - 227304 | 35395.5 |
| argininosuccinate lyase | BK664_00845 | Not Available | Positive | 227601 - 229028 | 52252.5 |
| abc transporter permease | BK664_00850 | Not Available | Positive | 229178 - 230056 | 32624.8 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | BK664_00855 | Not Available | Positive | 230067 - 230831 | 28193.4 |
| abc transporter substrate-binding protein | BK664_00860 | Not Available | Positive | 230871 - 231695 | 29852.0 |
| polysaccharide deacetylase | BK664_00865 | Not Available | Positive | 231934 - 232782 | 32461.4 |
| polysaccharide deacetylase | BK664_00870 | Not Available | Positive | 232775 - 233662 | 32711.5 |
| mfs transporter | BK664_00880 | Not Available | Positive | 235133 - 236311 | 42546.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
