Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter substrate-binding protein | BK664_00730 | Not Available | Positive | 200208 - 201296 | 39982.7 |
| fad-dependent oxidoreductase | BK664_00735 | Not Available | Positive | 201293 - 202594 | 46683.1 |
| paraquat-inducible membrane protein a | BK664_00740 | Not Available | Positive | 202820 - 203416 | 22083.2 |
| paraquat-inducible membrane protein a | BK664_00745 | Not Available | Positive | 203413 - 204069 | 24383.8 |
| mammalian cell entry protein | BK664_00750 | Not Available | Positive | 204050 - 205705 | 59611.1 |
| hypothetical protein | BK664_00755 | Not Available | Positive | 205723 - 206283 | 20219.1 |
| two-component sensor histidine kinase | BK664_00760 | Not Available | Negative | 206234 - 207562 | 49760.8 |
| histidine phosphatase family protein | BK664_00765 | Not Available | Positive | 207854 - 208522 | 24154.1 |
| 4-amino-4-deoxy-l-arabinose lipid a transferase | BK664_00770 | Not Available | Positive | 208726 - 210447 | 64484.9 |
| iron abc transporter substrate-binding protein | BK664_00775 | Not Available | Positive | 210688 - 211701 | 35826.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
