Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_00680 | Not Available | Negative | 188926 - 189381 | 15699.2 |
| mechanosensitive ion channel protein | BK664_00685 | Not Available | Positive | 189754 - 192141 | 85999.2 |
| abc transporter substrate-binding protein | BK664_00690 | Not Available | Positive | 192356 - 193132 | 28125.6 |
| abc transporter | BK664_00695 | Not Available | Positive | 193223 - 193912 | 24894.1 |
| amino acid abc transporter permease | BK664_00700 | Not Available | Positive | 193927 - 194625 | 25983.6 |
| peptidase m14 | BK664_00705 | Not Available | Positive | 194635 - 195747 | 40514.9 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK664_00710 | Not Available | Positive | 195766 - 196530 | 28172.3 |
| rpir family transcriptional regulator | BK664_00715 | Not Available | Positive | 196651 - 197571 | 32553.3 |
| arac family transcriptional regulator | BK664_00720 | Not Available | Negative | 197584 - 198507 | 34606.2 |
| glutamine synthetase | BK664_00725 | Not Available | Positive | 198669 - 200027 | 50842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
