Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 178648 - 178763 | Not Available |
| hypothetical protein | BK664_00630 | Not Available | Negative | 177029 - 178858 | 65376.8 |
| acetyl-coa acetyltransferase | BK664_00635 | Not Available | Negative | 178927 - 180090 | 41134.3 |
| hypothetical protein | BK664_00640 | Not Available | Negative | 180240 - 180446 | 7702.59 |
| transcriptional regulator | BK664_00645 | Not Available | Negative | 180900 - 181892 | 37497.0 |
| acyl-coa dehydrogenase | BK664_00650 | Not Available | Positive | 182005 - 183246 | 45583.5 |
| nad(p)h dehydrogenase | BK664_00655 | Not Available | Positive | 183284 - 183997 | 26568.0 |
| rnd transporter | BK664_00665 | Not Available | Positive | 185225 - 186778 | 57714.2 |
| hemolysin d | BK664_00670 | Not Available | Positive | 186775 - 187923 | 41148.8 |
| hypothetical protein | BK664_00675 | Not Available | Positive | 187913 - 188941 | 36401.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
