Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane lipoprotein-sorting protein | BK664_00580 | Not Available | Negative | 164704 - 166062 | 50719.8 |
| hypothetical protein | BK664_00585 | Not Available | Negative | 166135 - 166518 | 13303.8 |
| cytochrome c | BK664_00590 | Not Available | Negative | 166515 - 166907 | 13841.5 |
| monoamine oxidase | BK664_00595 | Not Available | Negative | 166904 - 168361 | 53332.3 |
| arac family transcriptional regulator | BK664_00600 | Not Available | Negative | 168550 - 169560 | 38017.7 |
| hypothetical protein | BK664_00605 | Not Available | Positive | 170708 - 171253 | 19290.9 |
| hypothetical protein | BK664_00610 | Not Available | Negative | 171509 - 171997 | 18315.8 |
| rnd transporter | BK664_00615 | Not Available | Negative | 172024 - 174462 | 88976.1 |
| glycosyl hydrolase | BK664_00620 | Not Available | Negative | 174499 - 175557 | 37523.3 |
| outer membrane lipoprotein-sorting protein | BK664_00625 | Not Available | Negative | 175635 - 176996 | 50035.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
