Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | BK664_00425 | Not Available | Positive | 116051 - 117403 | 48664.6 |
| abc transporter | BK664_00430 | Not Available | Positive | 117406 - 118755 | 49193.5 |
| mannuronan epimerase | BK664_00435 | Not Available | Negative | 118919 - 123745 | 166802.0 |
| ribose-phosphate pyrophosphokinase | BK664_00445 | Not Available | Negative | 124499 - 125464 | 35180.9 |
| phosphoribosyl transferase | BK664_00450 | Not Available | Positive | 126110 - 126817 | 25850.4 |
| arginine-ornithine antiporter | BK664_00455 | Not Available | Negative | 126976 - 128466 | 52549.4 |
| atpase p | BK664_00460 | Not Available | Positive | 128736 - 131018 | 82178.4 |
| thymidylate kinase | BK664_00465 | Not Available | Positive | 131246 - 131923 | 25345.6 |
| lysr family transcriptional regulator | BK664_00470 | Not Available | Negative | 132115 - 133017 | 34172.2 |
| mfs transporter | BK664_00475 | Not Available | Positive | 133356 - 134696 | 47138.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
