Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase | BK664_00375 | Not Available | Negative | 102764 - 104386 | 59558.8 |
| pas domain-containing sensor histidine kinase | BK664_00380 | Not Available | Positive | 104619 - 106895 | 84041.4 |
| dna-binding response regulator | BK664_00385 | Not Available | Positive | 106900 - 107535 | 23072.1 |
| ai-2e family transporter | BK664_00390 | Not Available | Positive | 107614 - 108714 | 38818.1 |
| dehydratase | BK664_00395 | Not Available | Positive | 108877 - 109341 | 17150.6 |
| patatin | BK664_00400 | Not Available | Positive | 109442 - 110626 | 42839.8 |
| hypothetical protein | BK664_00405 | Not Available | Negative | 110678 - 111325 | 23535.9 |
| carboxynorspermidine decarboxylase | BK664_00410 | Not Available | Positive | 111634 - 112731 | 41010.0 |
| saccharopine dehydrogenase | BK664_00415 | Not Available | Positive | 112759 - 114003 | 45311.8 |
| peptidase | BK664_00420 | Not Available | Positive | 114337 - 116058 | 61874.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
