Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp reductase | BK664_00330 | Not Available | Negative | 91047 - 91793 | 26656.8 |
| arac family transcriptional regulator | BK664_00335 | Not Available | Positive | 92117 - 93154 | 38711.1 |
| poly(3-hydroxyalkanoate) synthetase | BK664_00340 | Not Available | Negative | 93179 - 95788 | 96353.3 |
| phasin | BK664_00345 | Not Available | Positive | 96044 - 96613 | 19991.3 |
| polyhydroxyalkanoate synthesis repressor phar | BK664_00350 | Not Available | Negative | 96649 - 97161 | 18997.6 |
| porin | BK664_00355 | Not Available | Negative | 97408 - 98676 | 46228.0 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 100399 - 100752 | Not Available |
| acyl-coa dehydrogenase | BK664_00360 | Not Available | Negative | 98806 - 100578 | 63669.9 |
| cation acetate symporter | BK664_00365 | Not Available | Negative | 100643 - 102313 | 58885.6 |
| hypothetical protein | BK664_00370 | Not Available | Negative | 102313 - 102639 | 12132.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
