Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit beta | BK664_00280 | Not Available | Positive | 79784 - 80719 | 33758.1 |
| formate dehydrogenase subunit gamma | BK664_00285 | Not Available | Positive | 80716 - 81369 | 25364.6 |
| formate dehydrogenase accessory protein fdhe | BK664_00290 | Not Available | Positive | 81374 - 82300 | 33647.7 |
| l-seryl-trna(sec) selenium transferase | BK664_00295 | Not Available | Positive | 82377 - 83801 | 51269.1 |
| selenocysteine-specific translation elongation factor | BK664_00300 | Not Available | Positive | 83798 - 85705 | 69942.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 84194 - 84372 | Not Available |
| hypothetical protein | BK664_00310 | Not Available | Negative | 85814 - 87154 | 48212.9 |
| hydrolase | BK664_00315 | Not Available | Negative | 87218 - 87871 | 23529.3 |
| class i poly(r)-hydroxyalkanoic acid synthase | BK664_00320 | Not Available | Negative | 88011 - 89714 | 63959.6 |
| acetyl-coa acetyltransferase | BK664_00325 | Not Available | Negative | 89811 - 90989 | 40552.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
