Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | BK664_00230 | Not Available | Positive | 66330 - 68609 | 84986.8 |
| hybrid sensor histidine kinase/response regulator | BK664_00235 | Not Available | Positive | 68839 - 70758 | 70440.0 |
| hypothetical protein | BK664_00240 | Not Available | Negative | 70769 - 71014 | 9273.44 |
| hemerythrin | BK664_00245 | Not Available | Negative | 71407 - 71883 | 17878.6 |
| hypothetical protein | BK664_00250 | Not Available | Negative | 72136 - 72432 | 11509.6 |
| sodium:proton antiporter | BK664_00255 | Not Available | Negative | 72619 - 73962 | 48286.6 |
| nad(p)-dependent oxidoreductase | BK664_00260 | Not Available | Negative | 74092 - 74949 | 30729.8 |
| aminotransferase | BK664_00265 | Not Available | Negative | 75210 - 76364 | 42533.0 |
| sulfate abc transporter substrate-binding protein | BK664_00270 | Not Available | Positive | 76718 - 77308 | 21421.5 |
| formate dehydrogenase-n subunit alpha | BK664_00275 | Not Available | Positive | 77357 - 79783 | 90343.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
