Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine 3-dehydrogenase | BK664_00180 | Not Available | Positive | 49177 - 50634 | 49992.8 |
| alkaline proteinase inhibitor | BK664_00185 | Not Available | Positive | 50702 - 51127 | 15308.2 |
| peptidase | BK664_00190 | Not Available | Positive | 51316 - 53091 | 63535.5 |
| hemolysin d | BK664_00195 | Not Available | Positive | 53088 - 54422 | 48979.4 |
| peptidase | BK664_00200 | Not Available | Positive | 54425 - 55789 | 50832.6 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK664_00205 | Not Available | Positive | 55832 - 58789 | 103352.0 |
| autotransporter outer membrane beta-barrel domain-containing protein | BK664_00210 | Not Available | Positive | 59014 - 62061 | 105624.0 |
| polyurethanase | BK664_00215 | Not Available | Positive | 62245 - 64098 | 64564.5 |
| hypothetical protein | BK664_00220 | Not Available | Negative | 64232 - 64456 | 8035.76 |
| nuclease | BK664_00225 | Not Available | Positive | 64666 - 66333 | 64150.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
