Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK664_00080 | Not Available | Negative | 21759 - 22814 | 39174.8 |
| hypothetical protein | BK664_00085 | Not Available | Positive | 23019 - 25166 | 78429.6 |
| duf1656 domain-containing protein | BK664_00090 | Not Available | Positive | 25156 - 25356 | 7357.44 |
| efflux transporter periplasmic adaptor subunit | BK664_00095 | Not Available | Positive | 25361 - 26326 | 35311.2 |
| rnd transporter | BK664_00100 | Not Available | Negative | 26535 - 27956 | 51356.6 |
| multidrug efflux rnd transporter permease subunit | BK664_00105 | Not Available | Negative | 27953 - 31135 | 114899.0 |
| efflux transporter periplasmic adaptor subunit | BK664_00110 | Not Available | Negative | 31148 - 32401 | 44638.3 |
| lysr family transcriptional regulator | BK664_00115 | Not Available | Negative | 32722 - 33639 | 33380.4 |
| alcohol dehydrogenase | BK664_00120 | Not Available | Positive | 33909 - 34931 | 37078.7 |
| hypothetical protein | BK664_00125 | Not Available | Positive | 35508 - 36998 | 55049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
