Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Plasmid partition protein sopa | BK664_24910 | Not Available | Positive | 5401569 - 5402390 | 29356.9 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 9 - 2924 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 86 - 201 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 124 - 239 | Not Available |
| sugar abc transporter substrate-binding protein | BK664_00010 | Not Available | Negative | 489 - 1799 | 47606.5 |
| arac family transcriptional regulator | BK664_00015 | Not Available | Negative | 2029 - 2934 | 34711.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3417 - 4963 | Not Available |
| phospholipase | BK664_00020 | Not Available | Negative | 3061 - 3924 | 32605.5 |
| glycosyltransferase | BK664_00025 | Not Available | Negative | 4075 - 5370 | 48983.9 |
| hypothetical protein | BK664_00030 | Not Available | Negative | 5477 - 9250 | 139905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
