Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | BK664_11560 | Not Available | Positive | 2529867 - 2530925 | 37203.6 |
| Tail protein | BK664_11565 | Not Available | Positive | 2530934 - 2531524 | 21141.1 |
| Putative tail-collar fibre protein | BK664_11570 | Not Available | Positive | 2531765 - 2532457 | 22934.1 |
| hypothetical protein | BK664_11575 | Not Available | Positive | 2532467 - 2532697 | 8386.86 |
| hypothetical protein | BK664_11580 | Not Available | Negative | 2532825 - 2533685 | 32369.9 |
| Attr | Not Available | Not Available | Positive | 2533728 - 2533739 | Not Available |
| Attr | Not Available | Not Available | Positive | 2534837 - 2534848 | Not Available |
| Putative endolysin | BK664_11585 | Not Available | Positive | 2535102 - 2535527 | 15515.3 |
| Modification methylase | BK664_24650 | Not Available | Negative | 5361121 - 5361999 | 32742.0 |
| hypothetical protein | BK664_24655 | Not Available | Negative | 5362008 - 5363711 | 64006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
