Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage antirepressor | BK664_11410 | Not Available | Positive | 2507103 - 2507333 | 8347.98 |
| Dna-binding protein | BK664_11415 | Not Available | Positive | 2507533 - 2508195 | 24736.0 |
| Helix-turn-helix dna binding domain protein | BK664_11420 | Not Available | Positive | 2508207 - 2508986 | 28013.7 |
| Putative replication protein p | BK664_11425 | Not Available | Positive | 2508983 - 2509684 | 25678.1 |
| hypothetical protein | BK664_11430 | Not Available | Positive | 2509677 - 2509880 | 7695.26 |
| Nuclease | BK664_11435 | Not Available | Positive | 2510005 - 2510436 | 15723.5 |
| Integrase | BK664_11440 | Not Available | Positive | 2510433 - 2511722 | 48186.3 |
| Hypothetical protein | BK664_11445 | Not Available | Positive | 2511934 - 2512248 | 11177.4 |
| Putative antitermination q protein | BK664_11450 | Not Available | Positive | 2512252 - 2512605 | 13279.1 |
| hypothetical protein | BK664_11455 | Not Available | Positive | 2512809 - 2513126 | 11384.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
