Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BK664_04325 | Not Available | Negative | 1005523 - 1006032 | 18346.2 |
| Dna-binding protein | BK664_04330 | Not Available | Negative | 1006032 - 1006232 | 7203.72 |
| Transcriptional regulator | BK664_04335 | Not Available | Positive | 1006325 - 1006672 | 13089.6 |
| Hypothetical protein | BK664_04340 | Not Available | Negative | 1007012 - 1007269 | 9700.68 |
| Portal protein | BK664_04345 | Not Available | Negative | 1007335 - 1008213 | 32964.2 |
| Putative terminase atpase subunit | BK664_04350 | Not Available | Negative | 1008125 - 1010182 | 77371.2 |
| Capsid-scaffolding protein | BK664_04355 | Not Available | Positive | 1010345 - 1011256 | 33191.4 |
| Major capsid protein | BK664_04360 | Not Available | Positive | 1011258 - 1012274 | 37284.0 |
| Putative terminase endonuclease subunit | BK664_04365 | Not Available | Positive | 1012274 - 1012990 | 26563.7 |
| Putative head completion/stabilization protein | BK664_04370 | Not Available | Positive | 1013092 - 1013553 | 17270.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
