Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_28680 | Not Available | Negative | 6269383 - 6270528 | 41271.7 |
| transposase | BK658_28685 | Not Available | Negative | 6271187 - 6271927 | 28147.4 |
| transposase | BK658_28690 | Not Available | Negative | 6272020 - 6272316 | 10799.0 |
| Attl | Not Available | Not Available | Positive | 997718 - 997740 | Not Available |
| Integrase | BK664_04295 | Not Available | Negative | 999975 - 1001159 | 45100.3 |
| hypothetical protein | BK664_04300 | Not Available | Negative | 1001428 - 1001676 | 8599.16 |
| hypothetical protein | BK664_04305 | Not Available | Negative | 1001743 - 1002036 | 10626.6 |
| Toprim domain-containing protein | BK664_04310 | Not Available | Negative | 1002052 - 1004850 | 105778.0 |
| Hypothetical protein | BK664_04315 | Not Available | Negative | 1004855 - 1005088 | 8501.44 |
| hypothetical protein | BK664_04320 | Not Available | Negative | 1005161 - 1005526 | 13507.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
