Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_28615 | Not Available | Positive | 6259270 - 6259644 | 14298.0 |
| hypothetical protein | BK658_28620 | Not Available | Positive | 6259788 - 6260369 | 21527.8 |
| short-chain dehydrogenase | BK658_28625 | Not Available | Negative | 6260643 - 6260909 | 9472.58 |
| hypothetical protein | BK658_28630 | Not Available | Negative | 6260906 - 6261190 | 10248.0 |
| hypothetical protein | BK658_28635 | Not Available | Positive | 6261697 - 6262314 | 24577.3 |
| transposase | BK658_28645 | Not Available | Positive | 6263725 - 6264057 | 12036.5 |
| transposase | BK658_28650 | Not Available | Positive | 6264054 - 6264389 | 12353.2 |
| short-chain dehydrogenase | BK658_28660 | Not Available | Positive | 6266100 - 6266816 | 25024.3 |
| hypothetical protein | BK658_28670 | Not Available | Negative | 6267640 - 6268386 | 26243.3 |
| hypothetical protein | BK658_28675 | Not Available | Negative | 6268424 - 6269353 | 33957.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
