Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate-semialdehyde dehydrogenase | BK658_28545 | Not Available | Positive | 6242413 - 6243879 | 51282.0 |
| n-succinylarginine dihydrolase | BK658_28550 | Not Available | Positive | 6244018 - 6245364 | 48724.7 |
| topoisomerase ii | BK658_28555 | Not Available | Positive | 6245428 - 6245715 | 10597.4 |
| succinylglutamate desuccinylase | BK658_28560 | Not Available | Positive | 6245728 - 6246738 | 37750.2 |
| transposase | BK658_28565 | Not Available | Positive | 6246834 - 6247226 | 14633.6 |
| transposase | BK658_28570 | Not Available | Positive | 6247319 - 6248023 | 26974.1 |
| is1182 family transposase | BK658_28575 | Not Available | Negative | 6248204 - 6249640 | 53965.9 |
| hypothetical protein | BK658_28590 | Not Available | Positive | 6252749 - 6253489 | 26841.4 |
| hypothetical protein | BK658_28595 | Not Available | Negative | 6254420 - 6254683 | 10079.0 |
| glycosyl transferase | BK658_28600 | Not Available | Positive | 6254799 - 6255812 | 37070.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
