Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | BK658_28495 | Not Available | Positive | 6227023 - 6228978 | 71513.3 |
| abc transporter substrate-binding protein | BK658_28500 | Not Available | Positive | 6229670 - 6230446 | 28115.9 |
| abc transporter | BK658_28505 | Not Available | Positive | 6230538 - 6231227 | 24824.1 |
| amino acid abc transporter permease | BK658_28510 | Not Available | Positive | 6231224 - 6231922 | 26174.8 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK658_28515 | Not Available | Positive | 6231959 - 6232723 | 28065.2 |
| arac family transcriptional regulator | BK658_28520 | Not Available | Positive | 6232836 - 6233816 | 36408.7 |
| hypothetical protein | BK658_28525 | Not Available | Negative | 6233850 - 6238565 | 177341.0 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | BK658_28530 | Not Available | Positive | 6238852 - 6240072 | 43479.1 |
| arginine/ornithine succinyltransferase subunit alpha | BK658_28535 | Not Available | Positive | 6240300 - 6241319 | 37072.9 |
| arginine n-succinyltransferase | BK658_28540 | Not Available | Positive | 6241388 - 6242413 | 37348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
