Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_28390 | Not Available | Negative | 6199108 - 6200022 | 31431.2 |
| rnd transporter | BK658_28395 | Not Available | Negative | 6200093 - 6201568 | 51593.0 |
| multidrug transporter subunit mdtc | BK658_28400 | Not Available | Negative | 6201569 - 6204694 | 110978.0 |
| multidrug transporter subunit mdtc | BK658_28405 | Not Available | Negative | 6204700 - 6207765 | 109881.0 |
| efflux transporter periplasmic adaptor subunit | BK658_28410 | Not Available | Negative | 6207779 - 6208906 | 39680.6 |
| tetr family transcriptional regulator | BK658_28415 | Not Available | Positive | 6209168 - 6209776 | 22563.8 |
| glcg protein | BK658_28420 | Not Available | Negative | 6209889 - 6210329 | 14640.8 |
| glyoxylate carboligase | BK658_28425 | Not Available | Positive | 6210598 - 6212373 | 64258.8 |
| hydroxypyruvate isomerase | BK658_28430 | Not Available | Positive | 6212501 - 6213283 | 28719.1 |
| 2-hydroxy-3-oxopropionate reductase | BK658_28435 | Not Available | Positive | 6213441 - 6214331 | 30549.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
