Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclase | BK658_28280 | Not Available | Positive | 6172632 - 6173333 | 25480.3 |
| hypothetical protein | BK658_28295 | Not Available | Negative | 6175058 - 6175795 | 27768.2 |
| branched-chain amino acid transport system ii carrier protein | BK658_28300 | Not Available | Negative | 6176095 - 6177408 | 45358.1 |
| succinate--coa ligase subunit alpha | BK658_28305 | Not Available | Negative | 6177827 - 6178708 | 29931.5 |
| succinate--coa ligase subunit beta | BK658_28310 | Not Available | Negative | 6178708 - 6179874 | 41286.9 |
| dihydrolipoyl dehydrogenase | BK658_28315 | Not Available | Negative | 6180054 - 6181490 | 49839.3 |
| dihydrolipoamide succinyltransferase | BK658_28320 | Not Available | Negative | 6181602 - 6182819 | 42069.9 |
| 2-oxoglutarate dehydrogenase e1 component | BK658_28325 | Not Available | Negative | 6182862 - 6185693 | 106382.0 |
| succinate dehydrogenase iron-sulfur subunit | BK658_28330 | Not Available | Negative | 6185956 - 6186660 | 26081.6 |
| succinate dehydrogenase flavoprotein subunit | BK658_28335 | Not Available | Negative | 6186672 - 6188447 | 63676.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
