Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease v subunit beta | BK658_28230 | Not Available | Positive | 6158519 - 6162208 | 138027.0 |
| exodeoxyribonuclease v subunit alpha | BK658_28235 | Not Available | Positive | 6162205 - 6164292 | 76402.9 |
| amino acid abc transporter permease/atp-binding protein | BK658_28240 | Not Available | Negative | 6164358 - 6165896 | 56524.4 |
| amino acid abc transporter substrate-binding protein | BK658_28245 | Not Available | Negative | 6165996 - 6166796 | 28524.2 |
| 2og-fe(ii) oxygenase | BK658_28250 | Not Available | Negative | 6166839 - 6167897 | 39134.5 |
| xylose isomerase | BK658_28255 | Not Available | Negative | 6167910 - 6168761 | 32559.4 |
| hypothetical protein | BK658_28260 | Not Available | Positive | 6169112 - 6169687 | 20714.2 |
| diguanylate cyclase | BK658_28265 | Not Available | Positive | 6169684 - 6170952 | 45589.9 |
| hypothetical protein | BK658_28270 | Not Available | Positive | 6170958 - 6171461 | 18106.6 |
| histidine phosphatase family protein | BK658_28275 | Not Available | Negative | 6171579 - 6172142 | 20913.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
