Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-shock protein | BK654_08160 | Not Available | Negative | 1895050 - 1895499 | 16364.3 |
| trna dihydrouridine(16) synthase dusc | BK654_08165 | Not Available | Negative | 1895619 - 1896578 | 35188.8 |
| 4-hydroxybenzoyl-coa thioesterase | BK654_08170 | Not Available | Negative | 1897088 - 1897537 | 17207.5 |
| alpha/beta hydrolase | BK654_08175 | Not Available | Negative | 1897583 - 1898416 | 30162.2 |
| tetr family transcriptional regulator | BK654_08180 | Not Available | Negative | 1898445 - 1898984 | 19198.2 |
| Trna-glu | Not Available | Not Available | Positive | 1899166 - 1899241 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1899319 - 1899394 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1899448 - 1899523 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1899603 - 1899678 | Not Available |
| glutamate--trna ligase | BK654_08205 | Not Available | Negative | 1899825 - 1901306 | 56252.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
