Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_27885 | Not Available | Negative | 6072483 - 6073436 | 35793.5 |
| amidohydrolase | BK658_27890 | Not Available | Positive | 6073578 - 6074747 | 41640.8 |
| abc transporter substrate-binding protein | BK658_27895 | Not Available | Positive | 6074842 - 6075630 | 28214.6 |
| hypothetical protein | BK658_27900 | Not Available | Negative | 6075785 - 6076063 | 10016.3 |
| hypothetical protein | BK658_27905 | Not Available | Positive | 6076326 - 6076667 | 12707.3 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | BK658_27910 | Not Available | Positive | 6076806 - 6077717 | 32018.6 |
| phosphoglycerate mutase | BK658_27915 | Not Available | Negative | 6077728 - 6078288 | 20857.2 |
| log family protein | BK658_27920 | Not Available | Negative | 6078387 - 6079760 | 50606.1 |
| cytochrome b | BK658_27925 | Not Available | Positive | 6080231 - 6080824 | 22379.4 |
| molybdopterin-binding protein | BK658_27930 | Not Available | Positive | 6080828 - 6081601 | 29062.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
