Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein | BK658_27835 | Not Available | Positive | 6061153 - 6061725 | 20542.3 |
| ggdef domain-containing protein | BK658_27840 | Not Available | Positive | 6061829 - 6063460 | 59529.1 |
| reactive intermediate/imine deaminase | BK658_27845 | Not Available | Positive | 6063608 - 6063988 | 13455.2 |
| hypothetical protein | BK658_27850 | Not Available | Negative | 6063998 - 6064711 | 26616.7 |
| murein l,d-transpeptidase | BK658_27855 | Not Available | Positive | 6064857 - 6066428 | 57961.7 |
| 2'-5' rna ligase | BK658_27860 | Not Available | Positive | 6066463 - 6067008 | 20192.5 |
| glycosyltransferase | BK658_27865 | Not Available | Negative | 6067535 - 6068389 | 32278.8 |
| glucarate dehydratase | BK658_27870 | Not Available | Negative | 6068622 - 6069971 | 49333.0 |
| mfs transporter | BK658_27875 | Not Available | Negative | 6070010 - 6071368 | 49519.9 |
| gntr family transcriptional regulator | BK658_27880 | Not Available | Positive | 6071755 - 6072465 | 25984.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
