Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK658_27680 | Not Available | Positive | 6014994 - 6016247 | 44693.4 |
| multidrug efflux rnd transporter permease subunit | BK658_27685 | Not Available | Positive | 6016263 - 6019442 | 114583.0 |
| rnd transporter | BK658_27690 | Not Available | Positive | 6019439 - 6020860 | 51198.4 |
| peptidase | BK658_27695 | Not Available | Positive | 6021338 - 6021895 | 20821.9 |
| sodium:proton antiporter | BK658_27700 | Not Available | Positive | 6022525 - 6023835 | 46328.2 |
| transketolase | BK658_27705 | Not Available | Positive | 6023909 - 6025960 | 73656.7 |
| mercuric reductase | BK658_27710 | Not Available | Negative | 6025970 - 6027493 | 55104.3 |
| hypothetical protein | BK658_27715 | Not Available | Negative | 6027493 - 6028842 | 50731.8 |
| glycosyl transferase | BK658_27720 | Not Available | Negative | 6029095 - 6037605 | 312852.0 |
| duf3309 domain-containing protein | BK658_27725 | Not Available | Negative | 6037647 - 6037805 | 5598.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
