Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quaternary ammonium transporter | BK658_27630 | Not Available | Negative | 6001305 - 6002210 | 32223.9 |
| abc transporter permease | BK658_27635 | Not Available | Negative | 6002260 - 6002943 | 24378.4 |
| quaternary ammonium transporter | BK658_27640 | Not Available | Negative | 6002943 - 6003572 | 22703.7 |
| abc transporter atp-binding protein | BK658_27645 | Not Available | Negative | 6003569 - 6004600 | 37964.2 |
| fatty acid desaturase | BK658_27650 | Not Available | Negative | 6004632 - 6005576 | 36172.2 |
| 12-oxophytodienoate reductase | BK658_27655 | Not Available | Negative | 6006390 - 6007508 | 40572.7 |
| marr family transcriptional regulator | BK658_27660 | Not Available | Positive | 6007611 - 6007985 | 14326.4 |
| sugar abc transporter substrate-binding protein | BK658_27665 | Not Available | Positive | 6008517 - 6009719 | 42596.9 |
| ggdef domain-containing protein | BK658_27670 | Not Available | Positive | 6009707 - 6012727 | 112832.0 |
| hypothetical protein | BK658_27675 | Not Available | Negative | 6012782 - 6014068 | 45338.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
