Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | BK658_27375 | Not Available | Positive | 5938025 - 5938864 | 28417.2 |
| ai-2e family transporter | BK658_27380 | Not Available | Negative | 5938967 - 5940019 | 37868.4 |
| duf4892 domain-containing protein | BK658_27385 | Not Available | Negative | 5940091 - 5940897 | 29303.2 |
| glutathione s-transferase | BK658_27390 | Not Available | Negative | 5940921 - 5941580 | 24589.7 |
| alpha/beta hydrolase | BK658_27395 | Not Available | Negative | 5941631 - 5942482 | 30708.3 |
| alpha/beta hydrolase | BK658_27400 | Not Available | Negative | 5942479 - 5943285 | 30443.6 |
| esterase | BK658_27405 | Not Available | Negative | 5943569 - 5944012 | 15986.3 |
| amp-binding protein | BK658_27410 | Not Available | Negative | 5944043 - 5945710 | 60892.3 |
| phosphohistidine phosphatase sixa | BK658_27415 | Not Available | Negative | 5945909 - 5946358 | 16281.4 |
| lipase | BK658_27420 | Not Available | Negative | 5946355 - 5946702 | 12880.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
