Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein tadg | BK658_27275 | Not Available | Negative | 5921106 - 5921585 | 16792.7 |
| pilus assembly protein | BK658_27280 | Not Available | Negative | 5921594 - 5922928 | 45148.3 |
| flp pilus assembly protein cpab | BK658_27285 | Not Available | Negative | 5922996 - 5923817 | 28749.8 |
| aaa family atpase | BK658_27290 | Not Available | Negative | 5923833 - 5925167 | 50075.7 |
| hypothetical protein | BK658_27295 | Not Available | Negative | 5925170 - 5925700 | 18594.7 |
| pilus assembly protein pila | BK658_27300 | Not Available | Negative | 5925731 - 5925922 | 6433.98 |
| pilus assembly protein pila | BK658_27305 | Not Available | Negative | 5926079 - 5926270 | 6343.94 |
| dna-binding response regulator | BK658_27310 | Not Available | Positive | 5926706 - 5927569 | 33027.0 |
| Trna-gly | Not Available | Not Available | Positive | 5927629 - 5927704 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 5927707 - 5927782 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
