Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | BK658_27225 | Not Available | Negative | 5910962 - 5911690 | 26720.4 |
| abc transporter substrate-binding protein | BK658_27230 | Not Available | Negative | 5911747 - 5912526 | 27744.2 |
| secretin | BK658_27235 | Not Available | Positive | 5913501 - 5914742 | 43777.6 |
| hypothetical protein | BK658_27240 | Not Available | Positive | 5914778 - 5915488 | 25406.6 |
| hypothetical protein | BK658_27245 | Not Available | Positive | 5915508 - 5915780 | 9940.92 |
| type ii secretion system protein | BK658_27250 | Not Available | Negative | 5915974 - 5916936 | 34489.2 |
| secretion system protein | BK658_27255 | Not Available | Negative | 5916966 - 5917952 | 36791.4 |
| pilus assembly protein cpaf | BK658_27260 | Not Available | Negative | 5917949 - 5919391 | 53374.4 |
| hypothetical protein | BK658_27265 | Not Available | Negative | 5919395 - 5920618 | 44237.6 |
| hypothetical protein | BK658_27270 | Not Available | Negative | 5920612 - 5921106 | 17757.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
