Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | BK658_27175 | Not Available | Negative | 5901160 - 5902092 | 34382.7 |
| glutathione s-transferase | BK658_27180 | Not Available | Negative | 5902226 - 5902849 | 23423.8 |
| cysteine protease | BK658_27185 | Not Available | Negative | 5902904 - 5903563 | 24690.2 |
| acyl-coa dehydrogenase | BK658_27190 | Not Available | Positive | 5903813 - 5906260 | 88729.8 |
| dehydrogenase | BK658_27195 | Not Available | Positive | 5906356 - 5906754 | 15486.2 |
| transcriptional regulator | BK658_27200 | Not Available | Negative | 5906928 - 5907926 | 36708.6 |
| hypothetical protein | BK658_27205 | Not Available | Positive | 5908017 - 5908643 | 23045.3 |
| hypothetical protein | BK658_27210 | Not Available | Positive | 5908739 - 5909116 | 13520.2 |
| histidine/lysine/arginine/ornithine abc transporter atp-binding protein | BK658_27215 | Not Available | Negative | 5909388 - 5910152 | 28272.4 |
| amino acid abc transporter permease | BK658_27220 | Not Available | Negative | 5910255 - 5910965 | 26599.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
