Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | BK658_27125 | Not Available | Negative | 5892645 - 5893109 | 17111.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | BK658_27130 | Not Available | Negative | 5893109 - 5893873 | 27756.3 |
| hypothetical protein | BK658_27135 | Not Available | Negative | 5893870 - 5894055 | 6630.19 |
| tetraacyldisaccharide 4'-kinase | BK658_27140 | Not Available | Negative | 5894080 - 5895090 | 36839.7 |
| biopolymer transporter exbd | BK658_27145 | Not Available | Negative | 5895090 - 5895518 | 15455.5 |
| biopolymer transporter exbb | BK658_27150 | Not Available | Negative | 5895515 - 5896150 | 23002.6 |
| dna internalization-related competence protein comec/rec2 | BK658_27155 | Not Available | Negative | 5896261 - 5898495 | 81085.0 |
| atp-binding protein | BK658_27160 | Not Available | Positive | 5898631 - 5899146 | 19893.8 |
| hypothetical protein | BK658_27165 | Not Available | Positive | 5899875 - 5900249 | 13451.0 |
| abc transporter permease | BK658_27170 | Not Available | Negative | 5900384 - 5901163 | 28531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
