Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_26965 | Not Available | Negative | 5857304 - 5857624 | 11460.8 |
| duf4440 domain-containing protein | BK658_26970 | Not Available | Negative | 5857664 - 5858134 | 17690.8 |
| cyanate transporter | BK658_26975 | Not Available | Negative | 5858248 - 5859564 | 46038.1 |
| gntr family transcriptional regulator | BK658_26980 | Not Available | Negative | 5859554 - 5860213 | 24746.6 |
| motility quorum-sensing regulator mqsr | BK658_26985 | Not Available | Positive | 5860380 - 5860691 | 11746.2 |
| transcriptional regulator | BK658_26990 | Not Available | Positive | 5860688 - 5861170 | 18144.0 |
| glutamine abc transporter atp-binding protein | BK658_26995 | Not Available | Negative | 5861226 - 5861990 | 28864.4 |
| amino acid abc transporter permease | BK658_27000 | Not Available | Negative | 5862002 - 5863099 | 40774.4 |
| amino acid abc transporter permease | BK658_27005 | Not Available | Negative | 5863110 - 5864291 | 43394.9 |
| amino acid abc transporter substrate-binding protein | BK658_27010 | Not Available | Negative | 5864357 - 5865388 | 36703.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
