Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | BK658_26915 | Not Available | Negative | 5845802 - 5846920 | 41420.4 |
| leucyl aminopeptidase | BK658_26920 | Not Available | Positive | 5847228 - 5848718 | 52380.5 |
| dna polymerase iii subunit chi | BK658_26925 | Not Available | Positive | 5848779 - 5849207 | 16237.2 |
| dna polymerase iii subunit chi | BK658_26930 | Not Available | Positive | 5849215 - 5849640 | 15357.2 |
| valine--trna ligase | BK658_26935 | Not Available | Positive | 5849867 - 5852713 | 107456.0 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase | BK658_26940 | Not Available | Positive | 5852979 - 5854001 | 37917.6 |
| dipicolinate synthase | BK658_26945 | Not Available | Negative | 5854149 - 5854430 | 9671.8 |
| nucleoid-associated protein yejk | BK658_26950 | Not Available | Positive | 5854826 - 5855830 | 37501.2 |
| nrdh-redoxin | BK658_26955 | Not Available | Positive | 5855830 - 5856180 | 13240.2 |
| glutathione s-transferase | BK658_26960 | Not Available | Negative | 5856280 - 5857215 | 34319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
