Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ngg1p interacting factor nif3 | BK658_26865 | Not Available | Negative | 5832375 - 5832686 | 11367.5 |
| phosphoribosylformylglycinamidine synthase | BK658_26870 | Not Available | Negative | 5832692 - 5836588 | 140612.0 |
| lytic transglycosylase f | BK658_26875 | Not Available | Positive | 5836876 - 5838336 | 54411.8 |
| pyridoxine 5'-phosphate synthase | BK658_26880 | Not Available | Negative | 5838478 - 5839221 | 26709.2 |
| dna repair protein reco | BK658_26885 | Not Available | Negative | 5839273 - 5839962 | 25150.4 |
| gtpase era | BK658_26890 | Not Available | Negative | 5840153 - 5841055 | 33881.1 |
| ribonuclease iii | BK658_26895 | Not Available | Negative | 5841048 - 5841737 | 25537.7 |
| signal peptidase i | BK658_26900 | Not Available | Negative | 5841917 - 5842771 | 31922.1 |
| elongation factor 4 | BK658_26905 | Not Available | Negative | 5842777 - 5844576 | 66463.3 |
| lps export abc transporter permease lptg | BK658_26910 | Not Available | Negative | 5844748 - 5845809 | 38546.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
