Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | BK658_26660 | Not Available | Negative | 5787534 - 5788349 | 29276.3 |
| 2-oxobutyrate oxidase | BK658_26665 | Not Available | Negative | 5788378 - 5789415 | 38496.0 |
| oxidoreductase | BK658_26670 | Not Available | Positive | 5789831 - 5791213 | 50969.0 |
| hypothetical protein | BK658_26675 | Not Available | Negative | 5791319 - 5791519 | 7415.03 |
| 7-cyano-7-deazaguanine synthase quec | BK658_26680 | Not Available | Positive | 5791733 - 5792431 | 25770.0 |
| hypothetical protein | BK658_26685 | Not Available | Negative | 5792642 - 5793520 | 33262.2 |
| transcriptional regulator | BK658_26690 | Not Available | Negative | 5793510 - 5794109 | 22445.0 |
| serine hydroxymethyltransferase | BK658_26695 | Not Available | Positive | 5795769 - 5797124 | 48753.2 |
| hypothetical protein | BK658_26700 | Not Available | Negative | 5797654 - 5798208 | 20224.1 |
| hypothetical protein | BK658_26705 | Not Available | Negative | 5798808 - 5799809 | 35646.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
