Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | BK658_26610 | Not Available | Negative | 5775798 - 5776475 | 24968.9 |
| lysr family transcriptional regulator | BK658_26615 | Not Available | Negative | 5776583 - 5777482 | 32736.9 |
| mfs transporter | BK658_26620 | Not Available | Negative | 5777677 - 5778891 | 42389.0 |
| cytochrome c | BK658_26625 | Not Available | Positive | 5779122 - 5780387 | 44888.8 |
| (2fe-2s)-binding protein | BK658_26630 | Not Available | Positive | 5780384 - 5780857 | 17069.8 |
| aldehyde dehydrogenase | BK658_26635 | Not Available | Positive | 5780854 - 5783091 | 80411.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | BK658_26640 | Not Available | Positive | 5783209 - 5784378 | 42759.7 |
| alkene reductase | BK658_26645 | Not Available | Positive | 5784422 - 5785534 | 40639.1 |
| metal abc transporter permease | BK658_26650 | Not Available | Negative | 5785889 - 5786560 | 23818.3 |
| methionine abc transporter atp-binding protein | BK658_26655 | Not Available | Negative | 5786557 - 5787537 | 35268.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
