Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | BK658_26510 | Not Available | Positive | 5752626 - 5753390 | 28512.6 |
| endonuclease | BK658_26515 | Not Available | Negative | 5753519 - 5754394 | 31826.6 |
| dipeptidase | BK658_26520 | Not Available | Positive | 5754785 - 5756524 | 62548.6 |
| lysr family transcriptional regulator | BK658_26525 | Not Available | Negative | 5756658 - 5757071 | 15049.1 |
| hydrolase | BK658_26530 | Not Available | Negative | 5757138 - 5757791 | 23517.2 |
| lysr family transcriptional regulator | BK658_26535 | Not Available | Negative | 5757924 - 5758820 | 33148.0 |
| alpha/beta hydrolase | BK658_26540 | Not Available | Positive | 5758981 - 5759997 | 35952.9 |
| mechanosensitive ion channel protein mscs | BK658_26545 | Not Available | Positive | 5760084 - 5761511 | 51362.8 |
| hydrolase | BK658_26550 | Not Available | Negative | 5761555 - 5762181 | 22798.2 |
| amidohydrolase | BK658_26555 | Not Available | Negative | 5762250 - 5764088 | 67927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
