Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter periplasmic adaptor subunit | BK658_26410 | Not Available | Negative | 5733425 - 5734534 | 38335.9 |
| rnd transporter | BK658_26415 | Not Available | Positive | 5734755 - 5736215 | 51193.5 |
| short-chain dehydrogenase | BK658_26420 | Not Available | Positive | 5736388 - 5737173 | 28506.1 |
| long-chain fatty acid transport protein | BK658_26425 | Not Available | Negative | 5737286 - 5738557 | 45514.1 |
| tetr family transcriptional regulator | BK658_26430 | Not Available | Negative | 5738751 - 5739377 | 23145.6 |
| phytanoyl-coa dioxygenase | BK658_26435 | Not Available | Positive | 5739756 - 5740436 | 24995.5 |
| sodium:proton antiporter | BK658_26440 | Not Available | Positive | 5740720 - 5741394 | 24630.4 |
| hypothetical protein | BK658_26445 | Not Available | Negative | 5741650 - 5741880 | 7881.62 |
| hypothetical protein | BK658_26450 | Not Available | Negative | 5742230 - 5742493 | 9936.62 |
| hypothetical protein | BK658_26455 | Not Available | Positive | 5742847 - 5743053 | 7411.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
