Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_26150 | Not Available | Negative | 5671416 - 5672846 | 53847.3 |
| hypothetical protein | BK658_26155 | Not Available | Negative | 5673489 - 5673728 | 8799.62 |
| integration host factor subunit beta | BK658_26160 | Not Available | Negative | 5673752 - 5674048 | 11014.2 |
| hypothetical protein | BK658_26165 | Not Available | Negative | 5674222 - 5674503 | 10120.3 |
| 30s ribosomal protein s1 | BK658_26170 | Not Available | Negative | 5674699 - 5676390 | 62392.1 |
| cytidylate kinase | BK658_26175 | Not Available | Negative | 5676512 - 5677201 | 24794.8 |
| bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase | BK658_26180 | Not Available | Negative | 5677198 - 5679405 | 78068.5 |
| histidinol-phosphate transaminase | BK658_26185 | Not Available | Negative | 5679434 - 5680546 | 39868.6 |
| chorismate mutase | BK658_26190 | Not Available | Negative | 5680558 - 5681652 | 40360.6 |
| phosphoserine transaminase | BK658_26195 | Not Available | Negative | 5681652 - 5682737 | 39892.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
