Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_25945 | Not Available | Negative | 5620803 - 5621729 | 34095.1 |
| aldo/keto reductase | BK658_25950 | Not Available | Positive | 5621847 - 5622842 | 36233.3 |
| hypothetical protein | BK658_25955 | Not Available | Negative | 5622900 - 5623436 | 19360.4 |
| methyl-accepting chemotaxis protein | BK658_25960 | Not Available | Positive | 5623843 - 5625837 | 71618.3 |
| metal-binding protein | BK658_25965 | Not Available | Positive | 5625979 - 5626422 | 15670.0 |
| hypothetical protein | BK658_25970 | Not Available | Positive | 5626422 - 5626856 | 15978.0 |
| hydroxyacid dehydrogenase | BK658_25975 | Not Available | Positive | 5626954 - 5627907 | 34950.3 |
| starch synthase | BK658_25980 | Not Available | Positive | 5628459 - 5630027 | 56678.0 |
| malto-oligosyltrehalose trehalohydrolase | BK658_25985 | Not Available | Positive | 5630041 - 5631846 | 67189.5 |
| 4-alpha-glucanotransferase | BK658_25990 | Not Available | Positive | 5631843 - 5633924 | 76398.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
