Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_25895 | Not Available | Positive | 5603894 - 5608723 | 179710.0 |
| peptide abc transporter substrate-binding protein | BK658_25900 | Not Available | Positive | 5608802 - 5609803 | 37335.2 |
| acylase | BK658_25905 | Not Available | Negative | 5609887 - 5612232 | 86255.5 |
| fe2+ zn2+ uptake regulation protein | BK658_25910 | Not Available | Positive | 5612546 - 5612923 | 13818.6 |
| hypothetical protein | BK658_25915 | Not Available | Negative | 5612940 - 5613128 | 6883.98 |
| mfs transporter | BK658_25920 | Not Available | Positive | 5613725 - 5614972 | 44729.0 |
| acyl-protein synthase | BK658_25925 | Not Available | Positive | 5614995 - 5616122 | 41583.3 |
| long-chain-fatty-acyl-coa reductase | BK658_25930 | Not Available | Positive | 5616124 - 5618556 | 88832.7 |
| amp-dependent synthetase | BK658_25935 | Not Available | Positive | 5618591 - 5619883 | 47741.1 |
| hypothetical protein | BK658_25940 | Not Available | Positive | 5619994 - 5620845 | 32106.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
