Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacylase | BK658_25595 | Not Available | Negative | 5544992 - 5546449 | 52602.4 |
| rpir family transcriptional regulator | BK658_25600 | Not Available | Negative | 5546451 - 5547311 | 31052.3 |
| permease dsdx | BK658_25605 | Not Available | Negative | 5547328 - 5548677 | 47538.0 |
| hypothetical protein | BK658_25610 | Not Available | Positive | 5548970 - 5549548 | 21419.5 |
| cro/cl family transcriptional regulator | BK658_25615 | Not Available | Positive | 5549557 - 5549763 | 7638.61 |
| hypothetical protein | BK658_25620 | Not Available | Positive | 5549775 - 5550146 | 13912.4 |
| lysr family transcriptional regulator | BK658_25625 | Not Available | Negative | 5550147 - 5551058 | 33783.5 |
| nadph quinone reductase mdab | BK658_25630 | Not Available | Negative | 5551300 - 5551890 | 21926.1 |
| antibiotic biosynthesis monooxygenase | BK658_25635 | Not Available | Positive | 5552095 - 5552409 | 12461.7 |
| amino acid permease | BK658_25640 | Not Available | Negative | 5552431 - 5553843 | 51138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
