Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator pdhr | BK658_25390 | Not Available | Negative | 5496988 - 5497755 | 28977.6 |
| l-lactate permease | BK658_25395 | Not Available | Positive | 5498017 - 5499705 | 59568.9 |
| oxidoreductase | BK658_25400 | Not Available | Positive | 5499852 - 5500676 | 30133.9 |
| iron-sulfur cluster-binding protein | BK658_25405 | Not Available | Positive | 5500673 - 5502127 | 53486.5 |
| lactate utilization protein b/c | BK658_25410 | Not Available | Positive | 5502127 - 5502798 | 24988.9 |
| 4fe-4s ferredoxin | BK658_25415 | Not Available | Positive | 5502795 - 5505605 | 102247.0 |
| hypothetical protein | BK658_25420 | Not Available | Positive | 5505770 - 5506045 | 9671.31 |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 5506139 - 5506532 | Not Available |
| integrase | BK658_25430 | Not Available | Positive | 5506700 - 5507935 | 46863.5 |
| hypothetical protein | BK658_25435 | Not Available | Positive | 5508216 - 5509055 | 31733.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
