Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | BK658_25240 | Not Available | Negative | 5467111 - 5467380 | 10078.3 |
| trna pseudouridine(55) synthase trub | BK658_25245 | Not Available | Negative | 5467498 - 5468415 | 33456.1 |
| ribosome-binding factor a | BK658_25250 | Not Available | Negative | 5468419 - 5468820 | 14903.9 |
| translation initiation factor if-2 | BK658_25255 | Not Available | Negative | 5468980 - 5471496 | 90662.5 |
| transcription termination/antitermination protein nusa | BK658_25260 | Not Available | Negative | 5471523 - 5473004 | 54460.7 |
| ribosome maturation factor rimp | BK658_25265 | Not Available | Negative | 5473052 - 5473510 | 16996.4 |
| Trna-met | Not Available | Not Available | Positive | 5473650 - 5473726 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 5473823 - 5473908 | Not Available |
| preprotein translocase subunit secg | BK658_25280 | Not Available | Negative | 5473931 - 5474314 | 13053.7 |
| triose-phosphate isomerase | BK658_25285 | Not Available | Negative | 5474319 - 5475074 | 25988.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
