Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BK658_25135 | Not Available | Negative | 5438065 - 5438943 | 33709.1 |
| hypothetical protein | BK658_25140 | Not Available | Negative | 5438993 - 5441209 | 83455.5 |
| hypothetical protein | BK658_25145 | Not Available | Negative | 5441593 - 5442348 | 27165.4 |
| fe2+-dependent dioxygenase | BK658_25150 | Not Available | Negative | 5442351 - 5443031 | 25684.6 |
| ligand-gated channel protein | BK658_25155 | Not Available | Positive | 5443238 - 5445562 | 83140.4 |
| flavodoxin | BK658_25160 | Not Available | Positive | 5445709 - 5448240 | 93250.1 |
| hypothetical protein | BK658_25165 | Not Available | Positive | 5448780 - 5449058 | 10143.1 |
| pts fructose transporter subunit iibc | BK658_25170 | Not Available | Negative | 5449241 - 5450980 | 59888.3 |
| 1-phosphofructokinase | BK658_25175 | Not Available | Negative | 5450992 - 5451933 | 32622.2 |
| phosphoenolpyruvate--protein phosphotransferase | BK658_25180 | Not Available | Negative | 5451933 - 5454794 | 101630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
