Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | BK658_25080 | Not Available | Positive | 5427829 - 5429751 | 72463.4 |
| translation initiation factor if-3 | BK658_25085 | Not Available | Positive | 5429769 - 5430302 | 20064.6 |
| 50s ribosomal protein l35 | BK658_25090 | Not Available | Positive | 5430363 - 5430557 | 7368.38 |
| 50s ribosomal protein l20 | BK658_25095 | Not Available | Positive | 5430587 - 5430943 | 13328.7 |
| phenylalanine--trna ligase subunit alpha | BK658_25100 | Not Available | Positive | 5431053 - 5432069 | 38086.7 |
| phenylalanine--trna ligase subunit beta | BK658_25105 | Not Available | Positive | 5432096 - 5434474 | 86602.9 |
| integration host factor subunit alpha | BK658_25110 | Not Available | Positive | 5434478 - 5434780 | 11476.8 |
| merr family transcriptional regulator | BK658_25115 | Not Available | Positive | 5434761 - 5435117 | 13921.0 |
| Trna-pro | Not Available | Not Available | Positive | 5435207 - 5435283 | Not Available |
| ornithine decarboxylase | BK658_25130 | Not Available | Positive | 5436856 - 5438019 | 43443.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
