Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | BK658_25030 | Not Available | Positive | 5420991 - 5421968 | 33537.8 |
| laci family transcriptional regulator | BK658_25035 | Not Available | Positive | 5421972 - 5422991 | 36578.3 |
| ribokinase | BK658_25040 | Not Available | Positive | 5423015 - 5423932 | 30646.6 |
| d-ribose pyranase | BK658_25045 | Not Available | Positive | 5423929 - 5424333 | 14462.0 |
| nucleoside hydrolase | BK658_25050 | Not Available | Positive | 5424379 - 5425407 | 36965.8 |
| hypothetical protein | BK658_25055 | Not Available | Negative | 5425450 - 5425653 | 7320.65 |
| hypothetical protein | BK658_25060 | Not Available | Positive | 5425782 - 5426087 | 11080.2 |
| hypothetical protein | BK658_25065 | Not Available | Positive | 5426251 - 5426565 | 11007.2 |
| dna-binding protein | BK658_25070 | Not Available | Negative | 5426638 - 5426850 | 7697.03 |
| hypothetical protein | BK658_25075 | Not Available | Negative | 5427144 - 5427443 | 10806.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
