Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas brassicacearum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas brassicacearum strain 36D4 36D4_contig_130, whole
Gene Summary
Adenine Count
1376901 bp
Thymine Count
1384632 bp
Guanine Count
2125714 bp
Cytosine Count
2109743 bp
Genome Length
6998324 bp
Protein-coding Genes
5862 genes
Non-Coding Genes
104 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BK658_24830 | Not Available | Negative | 5385077 - 5385967 | 32598.6 |
| 3-isopropylmalate dehydratase large subunit | BK658_24835 | Not Available | Positive | 5386115 - 5387533 | 50524.6 |
| 3-isopropylmalate dehydratase small subunit | BK658_24840 | Not Available | Positive | 5387545 - 5388189 | 24111.4 |
| sam-dependent methyltransferase | BK658_24845 | Not Available | Positive | 5388334 - 5389101 | 28127.3 |
| 3-isopropylmalate dehydrogenase | BK658_24850 | Not Available | Positive | 5389167 - 5390249 | 38724.9 |
| aspartate-semialdehyde dehydrogenase | BK658_24855 | Not Available | Positive | 5390317 - 5391429 | 40620.4 |
| aspartate-semialdehyde dehydrogenase | BK658_24860 | Not Available | Positive | 5391681 - 5392691 | 35530.6 |
| peptidoglycan-binding protein | BK658_24865 | Not Available | Positive | 5392898 - 5395540 | 92707.0 |
| trna pseudouridine(38-40) synthase trua | BK658_24870 | Not Available | Positive | 5395844 - 5396668 | 30838.1 |
| n-(5'-phosphoribosyl)anthranilate isomerase | BK658_24875 | Not Available | Positive | 5396732 - 5397355 | 21620.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
